BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E05SP1|AL430241
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1789 1793 0.0
>3x_Contig1789
Length = 30977
Score = 1793 bits (904), Expect = 0.0
Identities = 905/906 (99%)
Strand = Plus / Plus
Query: 1 gatcacaccctaagatacacataaaagtccctatctcgcttcgttctgtgcttgtagacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18881 gatcacaccctaagatacacataaaagtccctatctcgcttcgttctgtgcttgtagacg 18940
Query: 61 actgggaaaacgtcacaaaagacagaaagctagtacaactacccagcgaacggccaatcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18941 actgggaaaacgtcacaaaagacagaaagctagtacaactacccagcgaacggccaatcg 19000
Query: 121 aacatatcttgtcccagttctatgcagatactagcaattcgacctcctcagtggtagaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19001 aacatatcttgtcccagttctatgcagatactagcaattcgacctcctcagtggtagaac 19060
Query: 181 aagctcaactctcagaatttctgcagggaataaaactctacttcaacttatccctgggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19061 aagctcaactctcagaatttctgcagggaataaaactctacttcaacttatccctgggga 19120
Query: 241 aattactcttgtaccgtctagaaagaatccaatatgcagaactactgaaagcacactcgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19121 aattactcttgtaccgtctagaaagaatccaatatgcagaactactgaaagcacactcgg 19180
Query: 301 agaaacagtacactgaaatttacggaattatccatctactaagactagtcactttactcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19181 agaaacagtacactgaaatttacggaattatccatctactaagactagtcactttactcc 19240
Query: 361 ccgaaatgatggaatcaagcaacgtcgatgaccaaactgccaagatcctagtgaaacagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19241 ccgaaatgatggaatcaagcaacgtcgatgaccaaactgccaagatcctagtgaaacagt 19300
Query: 421 gcgacattttactcgaatggatcgccataaacatcgcgaggaaaaacttcccagtagatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19301 gcgacattttactcgaatggatcgccataaacatcgcgaggaaaaacttcccagtagatc 19360
Query: 481 cctacataaacacgtcctcccaatacgagggggtcgcactaagcatgtaatatatctcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19361 cctacataaacacgtcctcccaatacgagggggtcgcactaagcatgtaatatatctcta 19420
Query: 541 ccacatctccagaccccaccacatacaccgttatatatatatatatyccccaaaaccctt 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 19421 ccacatctccagaccccaccacatacaccgttatatatatatatatcccccaaaaccctt 19480
Query: 601 ttttcggggaccccagaaatattatttccgggccgtgattataagcgatcaacatctgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19481 ttttcggggaccccagaaatattatttccgggccgtgattataagcgatcaacatctgaa 19540
Query: 661 aaacagtttcgattcgaccgtactcatcatagcataacaatcacaagacatcataaatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19541 aaacagtttcgattcgaccgtactcatcatagcataacaatcacaagacatcataaatat 19600
Query: 721 actgttcgttatccttaaatcatcagctgtcggagcctcggagtaagcagtgtacttcag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19601 actgttcgttatccttaaatcatcagctgtcggagcctcggagtaagcagtgtacttcag 19660
Query: 781 tatctattgatatatttacgctgtacagcagacggtggtagaaaatgatgggttctgaga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19661 tatctattgatatatttacgctgtacagcagacggtggtagaaaatgatgggttctgaga 19720
Query: 841 gtaaggaagcgtcggaggaaaaagtaggcggcagatacgtttgtcctcatccagattgtg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19721 gtaaggaagcgtcggaggaaaaagtaggcggcagatacgtttgtcctcatccagattgtg 19780
Query: 901 agaaga 906
||||||
Sbjct: 19781 agaaga 19786
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8387
Number of Sequences: 1807
Number of extensions: 8387
Number of successful extensions: 988
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)